Science

Pataigin’s science focuses on microbial lipids. The BACLIB method analyzes microbial lipid fingerprints to identify pathogens and determines antimicrobial resistance.

Lipid fingerprints

Each microbial species expresses a unique “fingerprint” of lipids in its membrane. BACLIB identifies pathogens in a specimen by detecting species-specific lipid fingerprints in a mass spectrum of microbial lipids.

BACLIB fingerprints of Gram-negative bacteria essentially comprise the unique pattern of lipid A molecules expressed by that species. Fingerprints for Gram-positive predominantly comprise patterns of cardiolipins and lipoteichoic acid. Fungal fingerprints are predominantly sphingolipids and sterols.

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Structure of an Escherichia coli lipid A molecule
Fig. 1Escherichia coli lipid A.

The BACLIB method

BACLIB uses mass spectrometry to measure the membrane lipids that uniquely identify microbial species. BACLIB performs a rapid lipid extraction on the target of a MALDI plate. Minimal handling steps result in high sensitivity and low handling time per specimen.

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A 1 µL sample drop on a spot of a brushed-steel BACLIB MALDI target plate
Fig. 2A sample drop on a BACLIB MALDI target plate.

Antimicrobial susceptibility testing (AST)

Some forms of antimicrobial resistance are detected as part of the initial, one-hour ID test.

A second test step determines MICs (minimum inhibitory concentrations) of antibiotics within six hours of sample collection.

Today, AST results require up to three days. BACLIB accelerates AST results to between one and six hours.

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BACLIB spectra of P. aeruginosa ATCC 47085: the resistant strain shows lipid A peaks at m/z 1404 and 1446 plus a shifted peak at 1569; the susceptible strain shows 1404 and 1446 only
Fig. 3Resistant and susceptible spectra.Sorensen et al., Sci Rep 2020